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Table 3 Comparison of expression values (log2)* as determined by transcriptome analysis and RT-qPCR.

From: In vitro anti-plasmodial activity of Dicoma anomala subsp. gerrardii (Asteraceae): identification of its main active constituent, structure-activity relationship studies and gene expression profiling

PlasmoDB ID

array

RT-qPCR

array

RT-qPCR

 

2 hpt

2 hpt

6 hpt

6 hpt

MAL7P1.93

1.09

1.29

1.35

2.12

MAL7P1.175

(oligo 1)

1.89

2.02

1.27

2.11

MAL7P1.175

(oligo 2)

1.98

 

1.7

 

PFL0055c

1.5

3.38

2.17

2.61

eTFIII (PFL0625c)

0.0037

housekeeping

-0.0946

housekeeping

  1. *Data numerical values were transformed to the log base 2 in order to treat gene induction and repression on an equal level mathematically.
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Malaria Journal

ISSN: 1475-2875

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