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Table 3 Measurements and indices of subpopulation genetic diversity

From: Sexual recombination is a signature of a persisting malaria epidemic in Peru

Cluster

No. of samples

No. of haplotypes

Genetic diversity

Linkage disequilibrium

   

He

Allelic richness

Private allelic richness

IAS

p-value

1

30

22

0.400

3.79

0.228

0.036

< 0.004

2

63

29

0.145

3.50

0.092

0.150

< 0.001

3

29

25

0.220

2.79

0.080

0.081

< 0.001

4

34

32

0.593

4.71

0.800

0.066

< 0.001

5

117

54

0.209

3.86

0.133

0.115

< 0.001

6

40

35

0.314

3.57

0.180

0.013

0.072

All Clusters

313

197

0.439

6.07

na

0.103

< 0.001