Table 3 The 29 genomic insertion sites identified by the ‘SOAP method’
From: Identification of piggyBac-mediated insertions in Plasmodium berghei by next generation sequencing
Chromosome | Range of insertion site | Number of supporting pair-end reads |
|---|---|---|
berg03 | 141655 ± (200 ~ 400 bp) | 1 |
berg04 | 138106 ± (200 ~ 400 bp) | 1 |
berg04 | 353862 ± (200 ~ 400 bp) | 1 |
berg04 | 374523 ± (200 ~ 400 bp) | 1 |
berg04 | 679800 ± (200 ~ 400 bp) | 1 |
berg05 | 272425 ± (200 ~ 400 bp) | 1 |
berg04 | 858235 ± (200 ~ 400 bp) | 1 |
berg06 | 534191 ± (200 ~ 400 bp) | 1 |
berg07 | 247428–247493 (65 bp) | 6 |
berg07 | 653302–653595 (293 bp) | 20 |
berg08 | 21190 ± (200 ~ 400 bp) | 1 |
berg08 | 1143631 ± (200 ~ 400 bp) | 1 |
berg08 | 1229311 ± (200 ~ 400 bp) | 1 |
berg09 | 1385754 ± (200 ~ 400 bp) | 1 |
berg10 | 859354 ± (200 ~ 400 bp) | 1 |
berg11 | 396596–396660 (64 bp) | 3 |
berg11 | 1132095 ± (200 ~ 400 bp) | 1 |
berg11 | 1236263–1236275 (12 bp) | 22 |
berg12 | 137149–137213 (64 bp) | 4 |
berg12 | 1663662 ± (200 ~ 400 bp) | 2 |
berg13 | 307464 ± (200 ~ 400 bp) | 2 |
berg13 | 1325560 ± (200 ~ 400 bp) | 1 |
berg13 | 1819639 ± (200 ~ 400 bp) | 1 |
berg13 | 2109829 ± (200 ~ 400 bp) | 1 |
berg13 | 2135273 ± (200 ~ 400 bp) | 1 |
berg14 | 906574–906725 (151 bp) | 3 |
berg14 | 190567 ± (200 ~ 400 bp) | 1 |
berg14 | 1963049 ± (200 ~ 400 bp) | 1 |
berg14 | 2223862 ± (200 ~ 400 bp) | 1 |