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Table 1 Summary of microsatellite markers, number of alleles, cumulative number of haplotypes and expected heterozygosity ( H E ) at each marker for Plasmodium falciparum and Plasmodium vivax isolates collected in Temotu Province

From: Population genetics of Plasmodium falciparum and Plasmodium vivax and asymptomatic malaria in Temotu Province, Solomon Islands

 

Locus

Chromosome location

Dye

n

No of alleles

H E

Cumulative number of haplotypes

Pf

Polyα

4

PET

45

7

0.52

7

PfPK2

12

NED

43

7

0.52

16

TAA87

6

VIC

45

5

0.59

17

TAA81

5

VIC

45

5

0.71

19

TA1

6

6FAM

41

4

0.27

19

TAA60

13

NED

44

4

0.55

19

ARA2

11

PET

45

4

0.70

19

TAA109

6

6FAM

44

3

0.46

19

Mean ± SE

  

45

4.88 ± 0.51

0.54 ± 0.05

 

Pv

MS8

12

VIC

60

20

0.94

20

Pv3.27

3

6FAM

66

16

0.88

42

MS16

9

NED

61

15

0.87

54

MS10

13

PET

58

12

0.89

54

MS5

6

NED

47

9

0.83

58

msp1F3

7

VIC

62

7

0.79

58

MS1

3

6FAM

48

5

0.75

58

Mean ± SE

  

67

12 ± 2.02

0.85 ± 0.02

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