Table 1 The frequency of amino-acid repeats of PfHRP2
From: Analysis of pfhrp2 genetic diversity in Senegal and implications for use of rapid diagnostic tests
Types | Repeat found in the HRP2 sequence | Repeat frequency in Senegal isolates N = 54 | Repeat frequency in Mali isolates N = 11 | Repeat frequency in Uganda isolates N = 9 |
|---|---|---|---|---|
0 | VLSAAVFASVLLLDNNNSAFNNNL | 54 (100% ) | 11 (100% ) | 9 (100% ) |
1 | AHHAHHVAD | 52 (96.29%) | 11 (100% ) | 9 (100% ) |
2 | AHHAHHAAD | 51 (94.4%) | 11 (100% ) | 9 (100% ) |
3 | AHHAHHAAY | 29 (53.7%) | 5 (45.45%) | 7 (78%) |
4 | AHH | 52 (96.29%) | 11 (100% ) | 9 (100% ) |
5 | AHHAHHASD | 20 (37.07%) | 2 (18.18%) | 0% |
6 | AHHATD | 45 (83.33%) | 10 (90.9%) | 9 (100% ) |
7 | AHHAAD | 51 (94.44%) | 11 (100% ) | 9 (100% ) |
8 | AHHAAY | 37 (68.51%) | 8 (72.72%) | 9 (100% ) |
9 | AAY | 3 (5.55%) | 0% | 0% |
10 | AHHAAAHHATD | 33 (61.1%) | 6 (54.54%) | 9 (100% ) |
11 | AHN | 0% | 0% | 0% |
12 | AHHAAAHHEAATH | 40 (74.07%) | 7 (63.63%) | 9 (100% ) |
13 | AHHASD | 1 (1.85%) | 0% | 1 (11%) |
14 | AHHAHHATD | 0% | 0% | 0% |
19 | AHHAA | 43 (79.62%) | 11 (100% ) | 8 (88.88%) |
20 | SHHD | 0% | 0% | 0% |
21 | AHHAHHATY | 0% | 0% | 0% |
22 | AHHAHHAGD | 0% | 0% | 0% |
23 | ARHAAD | 0% | 0% | 0% |
24 | AHHTHHAAD | 0% | 0% | 0% |