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Table 1 Primers and probes for qPCR

From: Comparison of diagnostic methods for the detection and quantification of the four sympatric Plasmodium species in field samples from Papua New Guinea

Species

Primer/

probe

Sequence 5'-3'

Fluorescent label

P. falciparum

Fal_F

TATTGCTTTTGAGAGGTTTTGTTACTTTG

 

P. falciparum

Fal_R

ACCTCTGACATCTGAATACGAATGC

 

P. falciparum

Fal_P

ACGGGTAGTCATGATTGAGTT

FAM-BHQ

P. vivax

Viv_F

GCTTTGTAATTGGAATGATGGGAAT

 

P. vivax

Viv_R

ATGCGCACAAAGTCGATACGAAG

 

P. vivax

Viv_P

AGCAACGCTTCTAGCTTA

HEX-BHQ

P.malariae

Mal_F

TGCCGACTAGGTGTTGGATGAT

 

P.malariae

Mal_R

CTAGTGAGTTTCCCCGTGTTGAGT

 

P.malariae

Mal_P

TGTTTCTTTTAGATAGCTTCCTTCAG

FAM-BHQ

P. ovale

Ova_F

CCAGCTCCAATAGCGTATATTAAA

 

P. ovale

Ova_R

ACACATTTTGSATAAGGAATGCAAAG*

 

P. ovale

Ova_P

TATAAGATGCTTAGRCAATACAACGTATCTG*

HEX-BHQ

  1. *Oligo includes a wobble (S: G or C; R: A or G)