Skip to main content

Table 1 Sequences of primers and probes used in the LNA kdr assay with 5′ and 3′ modifications indicated

From: Insecticide resistance in Anopheles gambiae from the northern Democratic Republic of Congo, with extreme knockdown resistance (kdr) mutation frequencies revealed by a new diagnostic assay

Name

5′ Fluorescence modification

Sequence

3′ Quencher modification

VGSC-F

 

CGTGTGCTATGCGGAGAATG

 

VGSC-R

 

CGATCTTGGTCCATGTTAATTTGC

 

Kdr-Leu

HEX

A+CGA+C+T+AAAT+TTC+C

IBFQ

Kdr-Phe

6-FAM

A+CGA+C+A+AAAT+TTC+C

IBFQ

Kdr-Ser

Cy5

+CGA+C+T+GAAT+TTC+C

IBRQ

  1. +, preceding a base indicates it is a LNA nucleotide