Genotypes and/or gene mutation loci | HaplotypesC | Coding single nucleotide polymorphism | Locus code and base substitutionD | Total number (%) | 1. Malaria cases in Yunnan Province No. (%) | 2. Malaria cases in Myanmar No. (%) |
---|---|---|---|---|---|---|
Sequences of k13 gene |  |  | – | 384 | 194 | 190 |
Wild genotype | Hap_1 | – | – | 202 | 126 | 76 |
Synonymous mutations |  |  | – |  |  |  |
 G449G | Hap_17 | c.1347 T > G | GGT > GGG | 1 (0.3) | 0 | 1 (0.5) |
 T451T | Hap_13 | c.1353 T > C | TTT > TTC | 1 (0.3) | 1 (0.5) | 0 |
 G674G | Hap_22 | c.2022 G > A | GGG > GGA | 1 (0.3) | 0 | 1 (0.5) |
Single mutants genotype |  |  |  | – |  |  |
 F446I* | Hap_2 | c.1338 T > A | TTT > ATT | 130 (33.6) | 49 (25.3) | 81 (42.6) |
 G450V* | Hap_15 | c.1349 G > T | GGA > GTA | 1 (0.3) | 0 | 1 (0.5) |
 N458Y* | Hap_7 | c.1372 A > T | AAT > TAT | 3 (0.8) | 2 (1.0) | 1 (0.5) |
 S459L* | Hap_9 | c.1376 C > T | TCG > TTG | 2 (0.5) | 2 (1.0) | 0 |
 C469Y* | Hap_10 | c.1407 G > A | TGC > TAC | 4 (1.0) | 1 (0.5) | 3 (1.6) |
 A481V* | Hap_20 | c.1442 C > T | GCT > GTT | 2 (0.5) | 0 | 2 (1.0) |
 F483S* | Hap_18 | c.1448 T > C | TTT > TCT | 1 (0.3) | 0 | 1 (0.5) |
 L492S* | Hap_19 | c.1475 T > C | TTA > TCA | 1 (0.3) | 0 | 1 (0.5) |
 G533A* | Hap_12 | c.1598 G > C | GGT > GCT | 2 (0.5) | 1 (0.5) | 1 (0.5) |
 P553L* | Hap_16 | c.1658 C > T | CCG > CTG | 3 (0.8) | 0 | 3 (1.6) |
 E556D* | Hap_5 | c.1668 A > T | GAA > GAT | 3 (0.8) | 1 (0.5) | 2 (1.0) |
 P574L* | Hap_8 | c.1721 C > T | CCT > CTT | 7 (1.8) | 2 (1.1) | 5 (2.6) |
 A578S* | Hap_11 | c.1732 G > T | GCT > TCT | 1 (0.3) | 1 (0.5) | 0 |
 C580Y* | Hap_14 | c.1739 G > A | TGT > TAT | 4 (1.0) | 0 | 4 (2.1) |
 V581I* | Hap_3 | c.1741 G > A | GTT > ATT | 1 (0.3) | 1 (0.5) | 0 |
 E668D* | Hap_4 | c.2004 G > C | GAG > GAC | 1 (0.3) | 1 (0.5) | 0 |
 A675V* | Hap_23 | c.2024 C > T | GCT > GTT | 1 (0.3) | 0 | 1 (0.5) |
 A676D* | Hap_6 | c.2027 C > A | GCC > GAC | 11 (2.9) | 6 (3.2) | 5 (2.6) |
Double mutants genotype |  | – |  | |||
 Y519K* | Hap_21 | c.1855 T > A, c.1857 T > G | TAT > AAG | 1 (0.3) | 0 | 1 (0.5) |
 G449G/A676D* | Hap_17 | c.1337T > G, c.2027 C > A | GGT > GGG,GCC > GAC | Number was the same above synonymous mutations |  | Yes |
Haplotype | Â | Â | Â | 23 | 12 | 18 |
Ka/Ks | Â | Â | Â | 12.2 | 16.3 | 10.9 |
He | Â | Â | Â | 0.6124 | 0.0481 | 0.044 |
H | Â | Â | Â | 0.0283 | 0.5182 | 0.651 |
Fst (P value) |  |  |  | – | 0.0410A (0.0020B) |  |